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Projects in Epilepsy
The following projects are currently in progress whithin this research
area:
Contact Us if you would like more
information.
Epileptic seizure detection
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Staff/Affiliates:
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Iven Mareels, Anthony Burkitt, David Grayden, Levin Kuhlmann
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Students:
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Dean Freestone, Andrea Varsavsky
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Collaborators/Sponsors:
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St Vincent's Hospital, NICTA
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Description:
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If detection of the onset of seizures were possible, devices
could be implanted within the brain in order to prevent a
seizure from occurring by using electrical stimulation (drug
delivery probably acts too slowly to abort a seizure). Current
seizure detection algorithms analyse the electrical signals
recorded from the brain. These algorithms draw on techniques
from signal processing, non-linear dynamical systems theory, and
machine learning. Moreover, they try to provide a seizure onset
signal within milliseconds after the actual seizure onset.
Our group is seeking students to both develop new seizure
detection algorithms, and implement other methods from the
literature, that can be compared with algorithms that will be
developed by our group. We have a primary interest in methods
based on signal processing and non-linear dynamical systems
theory, since they are usually simpler and easier to implement
in an implantable device. However, we are also interested in
looking at machine learning based methods in order to determine
the performance of all types of seizure detection algorithms. In
the long term, our group aims to use seizure detection
algorithms as part of an implanted device used to prevent
seizures.
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Epileptic seizure prediction
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Staff/Affiliates:
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Iven Mareels, Anthony Burkitt, David Grayden, Levin Kuhlmann
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Students:
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Elma O'Sullivan-Greene, Andre Peterson, Dean Freestone
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Collaborators/Sponsors:
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St Vincent's Hospital, Bionic
Ear Institute, NICTA
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Description:
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While seizure detection is necessary to activate an electrical
stimulation device at the right time to abort a seizure, seizure
prediction is also very important, and has a variety of benefits.
First, it can be used to generate an electrical stimulus just
before seizure onset in order to prevent a seizure from occurring.
This is more useful than seizure detection, which relies on
detecting the onset of a seizure, and thus there is a delay
between seizure onset and abortion of a seizure through electrical
stimulation. Second, anti-convulsant drugs can be slow acting (on
the time scale of minutes), thus if a seizure prediction method
could predict an event minutes in advance, it could activate a
drug delivery system to diffuse a drug into the seizure region of
the brain and prevent a seizure from occurring. Third, if a
seizure can be predicted minutes in advance the patient could be
warned and they can move themselves to safety. Fourth, patients
often undergo brain scans to determine the focus of epileptic
seizures for the purposes of surgical removal of the epileptic
region, these scans require injection of a radioactively labeled
marker used to indicate the focus. If a doctor could be warned
about a seizure a few minutes in advance they could inject the
marker at the right time to determine the seizure focus more
accurately.
Current seizure prediction algorithms analyse the electrical
signals recorded from the brain using methods similar to seizure
detection. These algorithms draw on techniques from signal
processing, non-linear dynamical systems theory, and machine
learning. Instead of providing a seizure onset signal within
milliseconds after the actual seizure onset, as is done by
detection algorithms, prediction algorithms try to predict
seizures on time scales of seconds, minutes, and even hours before
seizures, depending on the algorithm.
Our group is seeking students to both develop new seizure
prediction algorithms, and implement other methods from the
literature, that can be compared with algorithms that will be
developed by our group. We have a primary interest in methods
based on signal processing and non-linear dynamical systems
theory, since they are usually simpler and easier to implement in
an implantable device. However, we are also interested in looking
at machine learning based methods in order to determine the
performance of different seizure prediction algorithms. In the
long term, our group aims to use seizure prediction algorithms as
part of an implanted device used to prevent seizures.
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Neural modelling of epilepsy
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Staff/Affiliates:
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Anthony Burkitt, Hamish Meffin, David Grayden, Iven Mareels, Levin
Kuhlmann
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Students:
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Andre Peterson
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Collaborators/Sponsors:
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St Vincent's Hospital, Bionic
Ear Institute, Howard Florey
Institute
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Description:
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Despite years of research into epilepsy, little is actually known
about the underlying causes of epilepsy. Largely, because it can
occur in several parts of the brain, and involves large
populations of neurons (brain cells) that interact with one
another in a complex way. In an attempt to understand the
underlying causes of epilepsy we are forming a collaboration to
try to develop neural models of epilepsy at various scales of
brain structure.
At a low level, neurons connect to other neurons via
electrochemical connections called synapses. These synapses
involve ion channels that are activated by neurotransmitters (i.e.
a chemical messenger), and transfer electrical charge from one
cell to another. Thus providing the basis of electrochemical
signaling between cells. Certain types of ion channels are
genetically related to epileptics. At a larger scale, networks of
neurons that become overly excited are thought to be directly
associated with epileptic seizures. Depending on the interests of
the student we would like to begin developing neural models of
epilepsy at different scales: (1) ion channels/synapses, (2)
single neurons, or (3) networks of neurons. At each of these
levels we are interested in modeling the changes in dynamics
associated with changes in ion channel structure and properties.
These changes in ion channels are related to genetic mutations
that are associated with certain types of epilepsy
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Quantitative analysis of epileptic seizure
dynamics
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Staff/Affiliates:
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Anthony Burkitt
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Students:
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Dean Freestone
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Collaborators/Sponsors:
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Bionic Ear Institute, St
Vincent's Hospital, Bionic
Technologies Australia
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Description:
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Performing invasive experiments in humans with epilepsy presents
us with various ethical dilemmas. Thus scientists have developed
animal models of epilepsy as an alternative. In these models, the
genetic, electrochemical, and/or structural make-up of the normal
animal brain is altered such that 'epileptic-like' seizures can be
generated in the brain. Thus animal models provide a means of
trying to discover the underlying causes of epilepsy. The EEE
Department, St. Vincent's
Hospital of Melbourne and the Bionic
Ear Institute have formed a collaboration to study animal
models of epilepsy, as well as develop electrical stimulation or
anti-convulsant drug delivery mechanisms that could be used to
prevent seizures from occurring.
During physiological experiments in animal models, the responses
of brain cells (neurons) will be recorded while seizures are
generated in the brain. It is believed that seizures result from
populations of neurons which synchronize their activities and
become abnormally overactive.
Our group is seeking a student to analyse the responses of
populations of neurons recorded during seizures in different parts
of an animal brain. This will involve the application of
statistical, signal processing, and non-linear dynamical systems
theory methods to try and look for relationships, or interactions,
between neural responses within specific regions of the brain. The
main approach will be to look for synchrony between neural
responses using such methods as cross-correlation, phase synchrony
or non-linear interdependence. By performing a quantitative
analysis of the neural responses we hope to understand the way in
which neurons are recruited into a seizure, as well as the
sequence of events involved in seizures.
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Wireless implant grid for intracranial EEG
recording and electrical stimulation
This is a potential project. Students/staff can apply to participate.
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Description:
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Direct electrical stimulation of the brain has great potential for
being the primary means with which to prevent seizures. One way to
stimulate the brain is to place a grid of electrodes, in the
cranium, on top of the brain surface. Such a grid can be used for
the recording of electroencephalographic (EEG) signals (i.e. brain
waves), which can be analysed to detect or predict seizures.
To design an electrical stimulation implant for the prevention of
seizures, a significant degree of processing will be required to
detect/predict seizures and provide the appropriate stimulation
sequence. To increase the mobility of patients with implants, we
are seeking a student interested in developing a wireless
intracranial electrode grid, that can record electrical signals
from the brain, as well as provide electrical stimulation, and
communicate with an external device. An external device is
expected to be necessary for implementing seizure
detection/prediction algorithms, as well as for generating
electrical stimulation protocols.
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